Cancer Portal

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Updated: April 14, 2022

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Cbioportal.org

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Frequently Asked Questions
Visualize Your Data
KRAS, NRAS and 1 other ...
Tutorials and Webinars
About Us
Datasets

Social Handles

FAQs

1

What is cBioPortal used for?

The cBioPortal is an exploratory analysis tool for exploring large-scale cancer genomic data sets that hosts data from large consortium efforts, like TCGA and TARGET, as well as publications from individual labs.
2

What is cBioPortal for cancer genomics?

The cBio Cancer Genomics Portal (http://cbioportal.org) is an open-access resource for interactive exploration of multidimensional cancer genomics data sets, currently providing access to data from more than 5,000 tumor samples from 20 cancer studies.
3

How do I download RNA Seq data from TCGA?

  1. Go to GDC data portal.
  2. Click 'Data'
  3. Select types of cancer and files (RNA-seq in your case)
  4. Click 'Download Manifest' and save the manifest file.
  5. Install 'GDC data transfer tool (gdc-client)'.
  6. Go to the directory containing the manifest file.
4

How do I access TCGA data?

Please go to this page: https://tcga-data.nci.nih.gov/docs/publications/ to access all data associated with TCGA tumor specific publications.
2. Cancer.gov

GDC Data Portal - National Cancer Institute

https://portal.gdc.cancer.gov/

Harmonized Cancer Datasets. Genomic Data Commons Data Portal. Get Started by ... The GDC Data Portal is a robust data-driven platform that allows cancer

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